Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI88266.1 | SEI88310.1 | SAMN04488127_0699 | SAMN04488127_0700 | acetoacetyl-CoA synthetase. | crotonobetaine/carnitine-CoA ligase. | 0.844 |
SEI88266.1 | SEI88361.1 | SAMN04488127_0699 | SAMN04488127_0701 | acetoacetyl-CoA synthetase. | Short-chain fatty acids transporter. | 0.724 |
SEI88266.1 | SEI88399.1 | SAMN04488127_0699 | SAMN04488127_0702 | acetoacetyl-CoA synthetase. | Transcriptional regulator, TetR family. | 0.566 |
SEI88310.1 | SEI88266.1 | SAMN04488127_0700 | SAMN04488127_0699 | crotonobetaine/carnitine-CoA ligase. | acetoacetyl-CoA synthetase. | 0.844 |
SEI88310.1 | SEI88361.1 | SAMN04488127_0700 | SAMN04488127_0701 | crotonobetaine/carnitine-CoA ligase. | Short-chain fatty acids transporter. | 0.724 |
SEI88310.1 | SEI88399.1 | SAMN04488127_0700 | SAMN04488127_0702 | crotonobetaine/carnitine-CoA ligase. | Transcriptional regulator, TetR family. | 0.492 |
SEI88361.1 | SEI88266.1 | SAMN04488127_0701 | SAMN04488127_0699 | Short-chain fatty acids transporter. | acetoacetyl-CoA synthetase. | 0.724 |
SEI88361.1 | SEI88310.1 | SAMN04488127_0701 | SAMN04488127_0700 | Short-chain fatty acids transporter. | crotonobetaine/carnitine-CoA ligase. | 0.724 |
SEI88361.1 | SEI88399.1 | SAMN04488127_0701 | SAMN04488127_0702 | Short-chain fatty acids transporter. | Transcriptional regulator, TetR family. | 0.516 |
SEI88399.1 | SEI88266.1 | SAMN04488127_0702 | SAMN04488127_0699 | Transcriptional regulator, TetR family. | acetoacetyl-CoA synthetase. | 0.566 |
SEI88399.1 | SEI88310.1 | SAMN04488127_0702 | SAMN04488127_0700 | Transcriptional regulator, TetR family. | crotonobetaine/carnitine-CoA ligase. | 0.492 |
SEI88399.1 | SEI88361.1 | SAMN04488127_0702 | SAMN04488127_0701 | Transcriptional regulator, TetR family. | Short-chain fatty acids transporter. | 0.516 |