STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI99503.1cation:H+ antiporter. (332 aa)    
Predicted Functional Partners:
SEI99533.1
Hypothetical protein; Belongs to the UPF0178 family.
       0.782
SEI99567.1
AAA domain-containing protein.
       0.782
SEI76362.1
NhaP-type Na+/H+ or K+/H+ antiporter.
 
 
 
 0.617
SEI99597.1
Ferric iron reductase protein FhuF, involved in iron transport.
       0.591
SEJ27941.1
Arsenite-transporting ATPase.
  
   0.537
SEI99470.1
Hypothetical protein.
       0.483
SEJ31071.1
Hypothetical protein.
  
     0.436
SEJ70447.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
  
     0.412
Your Current Organism:
Bhargavaea ginsengi
NCBI taxonomy Id: 426757
Other names: B. ginsengi, Bacillus ginsengi, Bacillus ginsengi Qiu et al. 2009, Bacillus sp. ge14, Bacillus sp. ge15, Bhargavaea ginsengi (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6763, DSM 19038, strain ge14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.