STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ20792.1Phosphoglycerol transferase MdoB; Belongs to the LTA synthase family. (634 aa)    
Predicted Functional Partners:
SEJ32251.1
Site-specific DNA-methyltransferase (adenine-specific).
  
     0.717
nadK
NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
  
  0.640
SEI65019.1
Tetratricopeptide repeat-containing protein.
 
     0.636
SEJ67985.1
Nucleotidyltransferase-like.
  
     0.599
SEJ20760.1
Hypothetical protein.
       0.593
SEJ20823.1
Uncharacterized protein YqgQ.
 
     0.581
SEJ64115.1
Conserved hypothetical integral membrane protein.
  
     0.512
SEJ80966.1
YhzD-like protein.
  
     0.503
SEJ16277.1
Uncharacterized protein YozE, UPF0346 family; Belongs to the UPF0346 family.
  
     0.483
SEI64975.1
Uncharacterized protein YpiB, UPF0302 family; Belongs to the UPF0302 family.
  
     0.461
Your Current Organism:
Bhargavaea ginsengi
NCBI taxonomy Id: 426757
Other names: B. ginsengi, Bacillus ginsengi, Bacillus ginsengi Qiu et al. 2009, Bacillus sp. ge14, Bacillus sp. ge15, Bhargavaea ginsengi (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6763, DSM 19038, strain ge14
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