STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ43146.1Putative amino-acid transport system substrate-binding protein. (263 aa)    
Predicted Functional Partners:
SEJ43173.1
Putative amino-acid transport system permease protein.
 0.978
SEJ43199.1
Putative amino-acid transport system ATP-binding protein.
 
 0.961
SEI82238.1
Polar amino acid transport system permease protein.
  0.934
SEJ01214.1
Polar amino acid transport system permease protein.
  0.926
SEI91540.1
L-cystine transport system permease protein.
 0.919
SEI91579.1
L-cystine transport system permease protein.
 
 0.919
SEJ01183.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 
 0.909
SEI82277.1
Polar amino acid transport system ATP-binding protein.
 
 0.908
SEI91651.1
L-cystine transport system ATP-binding protein.
 
 0.908
SEJ52874.1
Tetratricopeptide repeat-containing protein.
   
 0.900
Your Current Organism:
Bhargavaea ginsengi
NCBI taxonomy Id: 426757
Other names: B. ginsengi, Bacillus ginsengi, Bacillus ginsengi Qiu et al. 2009, Bacillus sp. ge14, Bacillus sp. ge15, Bhargavaea ginsengi (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6763, DSM 19038, strain ge14
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