STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ53989.1Nitrogen regulatory protein A. (151 aa)    
Predicted Functional Partners:
SEJ53964.1
Two-component system, NarL family, sensor histidine kinase NreB.
 
  
 0.939
SEJ54040.1
Respiratory nitrate reductase chaperone NarJ.
 
     0.915
SEJ53953.1
Two component transcriptional regulator, LuxR family.
 
 0.897
SEJ53906.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
  
 0.849
SEJ54087.1
Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.807
SEJ54017.1
Nitrate reductase gamma subunit.
 
     0.795
SEJ53934.1
Hemerythrin HHE cation binding domain-containing protein.
 
     0.786
SEJ54066.1
Respiratory nitrate reductase beta subunit.
 
     0.768
SEJ46757.1
Phosphocarrier protein.
    
 0.688
SEJ47285.1
Phosphocarrier protein.
    
 0.688
Your Current Organism:
Bhargavaea ginsengi
NCBI taxonomy Id: 426757
Other names: B. ginsengi, Bacillus ginsengi, Bacillus ginsengi Qiu et al. 2009, Bacillus sp. ge14, Bacillus sp. ge15, Bhargavaea ginsengi (Qiu et al. 2009) Verma et al. 2012, CGMCC 1.6763, DSM 19038, strain ge14
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