STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS26671.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)    
Predicted Functional Partners:
OAS19385.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.784
OAS25780.1
Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.706
OAS19995.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.706
OAS26672.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.656
mhpB
3-(2,3-dihydroxyphenyl)propionate dioxygenase; Catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.654
OAS26124.1
NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.617
A5481_25585
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.575
OAS26632.1
3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.574
OAS25479.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.574
OAS24696.1
3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.574
Your Current Organism:
Methylobacterium platani
NCBI taxonomy Id: 427683
Other names: JCM 14648, KCTC 12901, M. platani, Methylobacterium platani Kang et al. 2007, Methylobacterium sp. PMB02, strain PMB02
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