STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS25885.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)    
Predicted Functional Partners:
OAS25928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.989
OAS25891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
OAS25886.1
CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OAS25927.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OAS22984.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.741
OAS20335.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.741
OAS20268.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.738
OAS14225.1
ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.705
OAS14653.1
Signal peptidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.626
OAS14233.1
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
    
  0.625
Your Current Organism:
Methylobacterium platani
NCBI taxonomy Id: 427683
Other names: JCM 14648, KCTC 12901, M. platani, Methylobacterium platani Kang et al. 2007, Methylobacterium sp. PMB02, strain PMB02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.