STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS25529.1alpha-L-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RimK family. (306 aa)    
Predicted Functional Partners:
OAS25528.1
triphosphoribosyl-dephospho-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.
 
     0.949
OAS25527.1
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.872
A5481_09230
Tetrahydromethanopterin C1 transfer protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.802
OAS25533.1
Formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.801
OAS25636.1
GHMP kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.800
OAS25536.1
Formylmethanofuran dehydrogenase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.797
ffsA
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
     0.790
OAS25534.1
Formylmethanofuran dehydrogenase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.789
OAS25568.1
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
    
 0.777
Your Current Organism:
Methylobacterium platani
NCBI taxonomy Id: 427683
Other names: JCM 14648, KCTC 12901, M. platani, Methylobacterium platani Kang et al. 2007, Methylobacterium sp. PMB02, strain PMB02
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