STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mchMethenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family. (327 aa)    
Predicted Functional Partners:
ffsA
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
 
 0.955
OAS25528.1
triphosphoribosyl-dephospho-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
OAS25529.1
alpha-L-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RimK family.
 
     0.949
OAS25534.1
Formylmethanofuran dehydrogenase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.949
A5481_09230
Tetrahydromethanopterin C1 transfer protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.948
OAS21488.1
Methylenetetrahydrofolate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.939
OAS25536.1
Formylmethanofuran dehydrogenase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.934
OAS25527.1
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.913
OAS25533.1
Formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.875
OAS16862.1
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.843
Your Current Organism:
Methylobacterium platani
NCBI taxonomy Id: 427683
Other names: JCM 14648, KCTC 12901, M. platani, Methylobacterium platani Kang et al. 2007, Methylobacterium sp. PMB02, strain PMB02
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