STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS19363.1Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (522 aa)    
Predicted Functional Partners:
OAS24119.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
OAS22848.1
Squalene synthase HpnD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.909
OAS26714.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.865
OAS19364.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.857
OAS22849.1
Squalene synthase HpnC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.836
OAS22228.1
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.799
OAS23425.1
Hydroxyneurosporene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.796
OAS22227.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.792
OAS18954.1
Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.707
OAS24118.1
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.699
Your Current Organism:
Methylobacterium platani
NCBI taxonomy Id: 427683
Other names: JCM 14648, KCTC 12901, M. platani, Methylobacterium platani Kang et al. 2007, Methylobacterium sp. PMB02, strain PMB02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.