STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS76047.1Putative chloramphenicol O-acetyltransferase; KEGG: bcz:BCZK2165 1.6e-23 cat; chloramphenicol acetyltransferase K00638; COG: COG4845 Chloramphenicol O-acetyltransferase. (107 aa)    
Predicted Functional Partners:
EDS75027.1
Metallo-beta-lactamase domain protein; KEGG: afu:AF0939 2.2e-07 ribonuclease Z K00784; COG: COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III; Psort location: Cytoplasmic, score: 8.87.
  
   
 0.525
EDS74239.1
Hypothetical protein; COG: COG0789 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.471
EDS75796.1
COG: COG2364 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.437
EDS76048.1
Hypothetical protein; COG: NOG16854 non supervised orthologous group.
       0.436
EDS76046.1
DEAD/DEAH box helicase; KEGG: sab:SAB1965c 4.8e-93 ATP-dependent RNA helicase; COG: COG0513 Superfamily II DNA and RNA helicases; Psort location: Cytoplasmic, score: 8.87; Belongs to the DEAD box helicase family.
       0.415
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.