STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS76048.1Hypothetical protein; COG: NOG16854 non supervised orthologous group. (84 aa)    
Predicted Functional Partners:
EDS76049.1
Hypothetical protein.
       0.473
EDS76050.1
SWIM zinc finger domain protein; KEGG: cpr:CPR_1663 6.0e-08 polC; DNA polymerase III, alpha subunit, gram-positive type K03763; COG: COG0847 DNA polymerase III, epsilon subunit and related 3-5 exonucleases; Psort location: Cytoplasmic, score: 8.87.
       0.473
EDS74400.1
Hypothetical protein; COG: COG4925 Uncharacterized conserved protein.
  
     0.463
EDS75976.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE1876 3.9e-38 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Extracellular, score: 9.55.
  
     0.448
EDS76047.1
Putative chloramphenicol O-acetyltransferase; KEGG: bcz:BCZK2165 1.6e-23 cat; chloramphenicol acetyltransferase K00638; COG: COG4845 Chloramphenicol O-acetyltransferase.
       0.436
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.