STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS76102.1Transposase; COG: COG2963 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87. (214 aa)    
Predicted Functional Partners:
EDS76101.1
Hypothetical protein; COG: COG2801 Transposase and inactivated derivatives.
 
    0.896
EDS75331.1
Hypothetical protein; COG: COG2801 Transposase and inactivated derivatives.
 
    0.720
EDS75328.1
Hypothetical protein; COG: COG2801 Transposase and inactivated derivatives.
 
    0.698
EDS76103.1
Hypothetical protein; COG: COG0393 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0145 family.
       0.555
EDS73784.1
Integrase core domain protein; KEGG: nwi:Nwi_0782 0.0014 integrase, catalytic region K00986; COG: COG2801 Transposase and inactivated derivatives.
  
    0.528
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.