STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS76114.1F5/8 type C domain protein; KEGG: vfi:VFA0994 3.8e-70 hyaluronate lyase precursor; COG: NOG08372 non supervised orthologous group; Psort location: Extracellular, score: 9.97. (2030 aa)    
Predicted Functional Partners:
EDS75824.1
LPXTG-motif cell wall anchor domain protein; KEGG: smu:SMU.78 7.2e-234 fruA; fructan hydrolase; exo-beta-D-fructosidase; fructanase, FruA K03332; COG: COG1621 Beta-fructosidases (levanase/invertase); Psort location: Cellwall, score: 9.93.
    
 
0.735
EDS74317.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
 
  
 0.676
EDS73904.1
Glycosyl hydrolase, family 88; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
 
  
 0.564
EDS75974.1
Hypothetical protein; KEGG: cpe:CPE1876 2.3e-61 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.560
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
    
  0.514
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
  0.511
nagJ
O-GlcNAcase NagJ; KEGG: cpe:CPE0191 4.1e-65 nagH; hyaluronoglucosaminidase K01197; COG: NOG11197 non supervised orthologous group; Psort location: Cellwall, score: 9.49.
  
    0.445
EDS75835.1
Putative mannose-6-phosphate isomerase, class I; KEGG: bth:BT0373 3.0e-20 mannose-6-phosphate isomerase K01809; COG: COG1482 Phosphomannose isomerase; Psort location: Cytoplasmic, score: 8.87.
  
     0.437
EDS75614.1
Hypothetical protein; COG: NOG18387 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.433
EDS75975.1
Hypothetical protein; KEGG: cpr:CPR_1843 3.5e-21 FucA K01206; COG: COG3669 Alpha-L-fucosidase.
 
   
 0.421
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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