STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75992.1Hypothetical protein; KEGG: fnu:FN1984 0.00068 thioredoxin reductase / glutaredoxin-like protein K00384; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 8.87. (105 aa)    
Predicted Functional Partners:
EDS75711.1
Hypothetical protein; KEGG: bcc:BCc_107 0.0071 nuoL; NADH dehydrogenase I chain L K00329; COG: NOG17674 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.999
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 0.999
sodC
KEGG: ctc:CTC00590 6.5e-25 superoxide dismutase (Cu-Zn) K04565; COG: COG2032 Cu/Zn superoxide dismutase.
   
 0.981
EDS75993.1
Putative permease; KEGG: rbe:RBE_0088 0.0082 nuoM; NADH dehydrogenase I chain M K00342; COG: COG0701 Predicted permeases; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.911
EDS74806.1
Putative thioredoxin-disulfide reductase; KEGG: cpe:CPE0783 1.3e-122 probable thioredoxin reductase K00384; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 9.65.
  
 0.886
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.881
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.848
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
   
   0.848
trxB
KEGG: bcl:ABC3038 3.0e-84 trxB; thioredoxin reductase K00384; COG: COG0492 Thioredoxin reductase; Psort location: Cytoplasmic, score: 9.65.
  
 0.843
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
   
   0.830
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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