STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS76013.1Hypothetical protein; KEGG: pfa:MAL13P1.148 0.0054 P. falciparum myosin K01553; COG: NOG14295 non supervised orthologous group. (80 aa)    
Predicted Functional Partners:
gpsA
KEGG: bce:BC1505 5.7e-74 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057; COG: COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.686
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.574
cmk
Cytidylate kinase; KEGG: bca:BCE_1623 2.5e-55 cmk; cytidylate kinase K00945; COG: COG0283 Cytidylate kinase; Psort location: Cytoplasmic, score: 8.87.
       0.539
EDS76014.1
Putative ACR, COG1399; COG: COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; Psort location: Cytoplasmic, score: 8.87.
       0.535
rpmF
COG: COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
       0.506
EDS75007.1
KEGG: bcz:BCZK3562 8.0e-08 dapA; dipicolinate synthase subunit A K06410; COG: NOG06157 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
   
    0.431
EDS76009.1
Hypothetical protein; KEGG: ddi:DDB0167703 8.1e-07 hypothetical protein K01971; COG: KOG1181 FOG: Low-complexity; Psort location: Cytoplasmic, score: 8.87.
       0.425
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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