STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75646.1Hypothetical protein; KEGG: cpr:CPR_0949 9.9e-09 chitinase B K01183; COG: COG3469 Chitinase. (263 aa)    
Predicted Functional Partners:
EDS74318.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
 
 
 0.864
EDS74319.1
Hypothetical protein; KEGG: mpe:MYPE9170 0.0016 polC; DNA polymerase III subunit alpha K03763; COG: NOG08372 non supervised orthologous group.
    
 0.862
EDS73901.1
Hypothetical protein; KEGG: cpe:CPE0191 1.7e-07 nagH; hyaluronoglucosaminidase K01197; COG: COG1409 Predicted phosphohydrolases.
    
 0.862
EDS75767.1
ROK family protein; KEGG: lac:LBA0886 2.8e-40 sugar kinase -putative transcriptional regulator K00845; COG: COG1940 Transcriptional regulator/sugar kinase; Psort location: Cytoplasmic, score: 9.98.
    
 0.843
EDS75411.1
ROK family protein; KEGG: bha:BH0797 1.7e-58 glucose kinase K00845; COG: COG1940 Transcriptional regulator/sugar kinase; Psort location: Cytoplasmic, score: 9.98.
    
 0.843
EDS74631.1
ROK family protein; KEGG: bha:BH0797 1.7e-58 glucose kinase K00845; COG: COG1940 Transcriptional regulator/sugar kinase; Psort location: Cytoplasmic, score: 9.98.
    
 0.843
EDS76081.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.842
EDS75403.1
Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: cpf:CPF_0259 4.6e-117 putative beta-N-acetylhexosaminidase K01207; COG: COG1472 Beta-glucosidase-related glycosidases.
   
 
 0.842
EDS75163.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpf:CPF_0259 2.6e-117 putative beta-N-acetylhexosaminidase K01207; COG: COG1472 Beta-glucosidase-related glycosidases.
   
 
 0.842
EDS74739.1
TIGR02677 family protein; KEGG: fnu:FN0522 0.0032 exonuclease SBCC K03546; COG: NOG04769 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.842
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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