STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75664.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (180 aa)    
Predicted Functional Partners:
nagA
KEGG: efa:EF3044 3.0e-75 nagA-2; N-acetylglucosamine-6-phosphate deacetylase K01443; COG: COG1820 N-acetylglucosamine-6-phosphate deacetylase.
       0.795
EDS75662.1
Sugar isomerase, AgaS family; KEGG: ppr:PBPRB0142 1.4e-84 putative phosphosugar isomerase K02082; COG: COG2222 Predicted phosphosugar isomerases; Psort location: Cytoplasmic, score: 8.87.
       0.506
yajC
Preprotein translocase, YajC subunit; Psort location: CytoplasmicMembrane, score: 9.75.
       0.483
EDS75661.1
PTS system fructose IIA component; KEGG: ppr:PBPRB0146 3.3e-21 putative PTS permease protein K02744; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; Psort location: Cytoplasmic, score: 8.87.
       0.480
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.