STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75671.1Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: bxe:Bxe_A4149 0.0022 cytochrome bd ubiquinol oxidase, subunit II K00426; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (327 aa)    
Predicted Functional Partners:
EDS75672.1
KEGG: bca:BCE_4668 1.8e-61 iron compound ABC transporter, ATP-binding protein K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.82.
 0.998
isdE
Heme ABC transporter, heme-binding protein isdE; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.994
EDS75668.1
Iron transport-associated domain protein; COG: COG5386 Cell surface protein.
  
 0.975
EDS74646.1
Periplasmic binding protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.970
EDS74644.1
ABC transporter, ATP-binding protein; KEGG: mmp:MMP0198 1.4e-31 ABC-type iron(III) transport system, ATP binding protein K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49.
 0.945
EDS74990.1
Putative iron-only hydrogenase system regulator; COG: NOG17852 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
 0.912
EDS75669.1
Iron transport-associated domain protein; KEGG: pfa:PF14_0327 3.9e-05 methionine aminopeptidase, type II, putative K01265; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
       0.784
EDS75667.1
Iron transport-associated domain protein.
     
 0.461
EDS74111.1
ABC transporter, ATP-binding protein; KEGG: pen:PSEEN1283 1.2e-62 livG; branched-chain amino acid ABC transporter, ATP-binding protein; COG: COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
    
  0.446
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.