STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75672.1KEGG: bca:BCE_4668 1.8e-61 iron compound ABC transporter, ATP-binding protein K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.82. (253 aa)    
Predicted Functional Partners:
EDS75671.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: bxe:Bxe_A4149 0.0022 cytochrome bd ubiquinol oxidase, subunit II K00426; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.998
isdE
Heme ABC transporter, heme-binding protein isdE; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.991
EDS74645.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.988
EDS75668.1
Iron transport-associated domain protein; COG: COG5386 Cell surface protein.
  
 0.962
EDS74646.1
Periplasmic binding protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.906
EDS75669.1
Iron transport-associated domain protein; KEGG: pfa:PF14_0327 3.9e-05 methionine aminopeptidase, type II, putative K01265; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
     
 0.788
EDS73874.1
COG: COG2832 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score: 9.99.
    0.489
EDS75667.1
Iron transport-associated domain protein.
     
 0.454
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.