STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75676.1Hypothetical protein; KEGG: lsl:LSL_1142 1.1e-38 6-phosphogluconolactonase K01057; COG: COG2706 3-carboxymuconate cyclase. (348 aa)    
Predicted Functional Partners:
EDS73904.1
Glycosyl hydrolase, family 88; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
  
    0.604
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
    0.560
EDS75675.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 2.5e-09 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.98.
  
    0.524
EDS74594.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: sco:SCO2786 7.0e-109 hexA, SCC105.17c; beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase; Psort location: Extracellular, score: 9.95.
 
     0.491
EDS75141.1
KEGG: efa:EF1922 0.00014 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; COG: COG1609 Transcriptional regulators; Psort location: Cytoplasmic, score: 9.98.
 
 
   0.488
EDS74896.1
Aldose 1-epimerase; KEGG: ldb:Ldb1268 4.3e-44 putative mutarotase K01785; COG: COG2017 Galactose mutarotase and related enzymes.
 
  
 0.464
EDS75973.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE1364 9.7e-17 beta-N-acetylhexosaminidase K01207; COG: NOG04032 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
  
    0.454
EDS75802.1
KEGG: lmf:LMOf2365_0442 1.4e-20 PTS system, fructose-specific, IIA component K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score: 8.87.
      
 0.416
EDS75580.1
KEGG: cpr:CPR_0550 6.2e-171 fructose specific permease K00890; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
      
 0.416
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.