STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75677.1Transcriptional regulator, AsnC family; COG: COG1522 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. (163 aa)    
Predicted Functional Partners:
EDS75678.1
Aminotransferase, class I/II; KEGG: cpe:CPE0711 9.7e-118 aspC; aspartate aminotransferase; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score: 8.87.
 
    0.950
EDS75817.1
Class II glutamine amidotransferase; KEGG: syn:sll1502 0. gltB; NADH-dependent glutamate synthase large subunit K00268; COG: COG0069 Glutamate synthase domain 2; Psort location: Cytoplasmic, score: 8.87.
     
 0.541
EDS75679.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.421
EDS75680.1
Hypothetical protein; KEGG: wbr:WGLp018 0.0014 surA; parvulin-like peptidyl-prolyl isomerase K03771; COG: COG2378 Predicted transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
  
    0.415
EDS75675.1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 2.5e-09 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.409
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.