STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75733.1LPXTG-motif cell wall anchor domain protein; KEGG: chu:CHU_3450 0.00077 CHU large protein; uncharacterized K01238; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 8.99. (1029 aa)    
Predicted Functional Partners:
EDS75301.1
COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 9.94.
  
     0.711
EDS74117.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE0191 1.9e-12 nagH; hyaluronoglucosaminidase K01197; COG: NOG04032 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
  
     0.543
EDS73673.1
DNA-binding helix-turn-helix protein; COG: COG2946 Putative phage replication protein RstA; Psort location: Cytoplasmic, score: 8.87.
  
     0.542
EDS74656.1
Hypothetical protein; COG: NOG16845 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.540
EDS73902.1
Hypothetical protein; KEGG: cpe:CPE0191 6.3e-08 nagH; hyaluronoglucosaminidase K01197; COG: NOG04032 non supervised orthologous group.
  
     0.539
srtB
Sortase, SrtB family; COG: COG4509 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
 
 
   0.507
EDS74242.1
KEGG: pen:PSEEN3042 3.2e-67 macB; macrolide ABC efflux protein MacB; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.486
EDS74745.1
KEGG: cpe:CPE1070 7.8e-45 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.98.
  
     0.446
EDS74657.1
KEGG: afu:AF1021 2.4e-27 ABC transporter, ATP-binding protein K02017; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.445
EDS75859.1
Hypothetical protein; COG: NOG21981 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.442
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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