STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75747.1Hypothetical protein; COG: NOG14245 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.26. (164 aa)    
Predicted Functional Partners:
EDS74579.1
LytTr DNA-binding domain protein; COG: COG3279 Response regulator of the LytR/AlgR family.
  
     0.615
EDS75425.1
Hypothetical protein; KEGG: tma:TM1254 2.9e-11 beta-phosphoglucomutase, putative K01838; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.514
EDS74804.1
Putative dihydroxyacetone kinase regulator; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
  
     0.514
EDS73945.1
PAP2 family protein; KEGG: spk:MGAS9429_Spy1565 3.0e-13 phosphatidylglycerophosphatase B K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.475
EDS75614.1
Hypothetical protein; COG: NOG18387 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.425
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.