STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75779.1COG: COG2834 Outer membrane lipoprotein-sorting protein. (352 aa)    
Predicted Functional Partners:
EDS75247.1
KEGG: spr:spr0622 2.1e-28 glnQ; ABC transporter ATP-binding protein - glutamine transport K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.99.
   
 
 0.950
EDS75248.1
KEGG: lwe:lwe2133 1.3e-31 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.950
EDS74242.1
KEGG: pen:PSEEN3042 3.2e-67 macB; macrolide ABC efflux protein MacB; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.950
EDS75724.1
KEGG: sth:STH3039 2.0e-32 N-acetylmuramoyl-L-alanine amidase K01448; COG: COG0860 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 8.87.
    
 
 0.829
cotE
Spore coat protein E; COG: NOG09743 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.774
EDS75152.1
Polysaccharide biosynthesis protein; KEGG: cac:CAC3205 0.0061 spoIIE; stage II sporulation protein E, serine phosphatase family K06382; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.773
EDS74606.1
Putative spore coat protein GerQ; COG: NOG14257 non supervised orthologous group.
  
     0.773
EDS75788.1
Peptidase, M23 family; KEGG: bas:BUsg310 1.6e-06 yebA; hypothetical 46.7 kD protein in msbB-ruvB; COG: COG0739 Membrane proteins related to metalloendopeptidases.
  
     0.772
EDS75841.1
Putative sporulation protein YunB; COG: NOG11559 non supervised orthologous group.
  
   
 0.771
yabP
Sporulation protein YabP; COG: NOG13819 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.767
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.