Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDS75796.1 | EDS75797.1 | CLOSPI_00326 | CLOSPI_00327 | COG: COG2364 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. | Transcriptional regulator, MarR family; KEGG: bja:bll2512 0.00071 putative acetyltransferase K03828; COG: COG1846 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. | 0.814 |
EDS75796.1 | EDS75798.1 | CLOSPI_00326 | CLOSPI_00328 | COG: COG2364 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. | 0.523 |
EDS75797.1 | EDS75796.1 | CLOSPI_00327 | CLOSPI_00326 | Transcriptional regulator, MarR family; KEGG: bja:bll2512 0.00071 putative acetyltransferase K03828; COG: COG1846 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. | COG: COG2364 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. | 0.814 |
EDS75797.1 | EDS75798.1 | CLOSPI_00327 | CLOSPI_00328 | Transcriptional regulator, MarR family; KEGG: bja:bll2512 0.00071 putative acetyltransferase K03828; COG: COG1846 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. | 0.519 |
EDS75798.1 | EDS75796.1 | CLOSPI_00328 | CLOSPI_00326 | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. | COG: COG2364 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. | 0.523 |
EDS75798.1 | EDS75797.1 | CLOSPI_00328 | CLOSPI_00327 | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. | Transcriptional regulator, MarR family; KEGG: bja:bll2512 0.00071 putative acetyltransferase K03828; COG: COG1846 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. | 0.519 |
EDS75798.1 | EDS75799.1 | CLOSPI_00328 | CLOSPI_00329 | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. | Putative alpha-1,2-mannosidase; KEGG: cpf:CPF_0184 3.7e-14 nagH; hyaluronidase K01197; COG: COG3537 Putative alpha-1,2-mannosidase; Psort location: Extracellular, score: 9.98. | 0.438 |
EDS75798.1 | gap | CLOSPI_00328 | CLOSPI_02162 | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. | KEGG: fth:FTH_1121 5.1e-128 gapA; glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134; COG: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.98. | 0.403 |
EDS75799.1 | EDS75798.1 | CLOSPI_00329 | CLOSPI_00328 | Putative alpha-1,2-mannosidase; KEGG: cpf:CPF_0184 3.7e-14 nagH; hyaluronidase K01197; COG: COG3537 Putative alpha-1,2-mannosidase; Psort location: Extracellular, score: 9.98. | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. | 0.438 |
gap | EDS75798.1 | CLOSPI_02162 | CLOSPI_00328 | KEGG: fth:FTH_1121 5.1e-128 gapA; glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134; COG: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.98. | MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. | 0.403 |