STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS75813.1Putative alpha-1,2-mannosidase; KEGG: cpe:CPE0191 4.7e-10 nagH; hyaluronoglucosaminidase K01197; COG: COG1404 Subtilisin-like serine proteases; Psort location: Extracellular, score: 9.73. (1984 aa)    
Predicted Functional Partners:
EDS75974.1
Hypothetical protein; KEGG: cpe:CPE1876 2.3e-61 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.763
EDS75975.1
Hypothetical protein; KEGG: cpr:CPR_1843 3.5e-21 FucA K01206; COG: COG3669 Alpha-L-fucosidase.
 
   
 0.684
EDS73904.1
Glycosyl hydrolase, family 88; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
  
     0.642
EDS73701.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 2.6e-08 beta-N-acetylhexosaminidase K01207; COG: NOG08372 non supervised orthologous group.
  
     0.577
EDS75814.1
Hypothetical protein.
       0.568
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.508
EDS75835.1
Putative mannose-6-phosphate isomerase, class I; KEGG: bth:BT0373 3.0e-20 mannose-6-phosphate isomerase K01809; COG: COG1482 Phosphomannose isomerase; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.489
nagJ
O-GlcNAcase NagJ; KEGG: cpe:CPE0191 4.1e-65 nagH; hyaluronoglucosaminidase K01197; COG: NOG11197 non supervised orthologous group; Psort location: Cellwall, score: 9.49.
 
     0.436
EDS74317.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
  
     0.401
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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