STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75876.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (134 aa)    
Predicted Functional Partners:
EDS75875.1
PTS system, Lactose/Cellobiose specific IIB subunit; KEGG: lpl:lp_1399 1.0e-10 pts15B; beta-glucosides PTS, EIIB K02760; COG: COG1440 Phosphotransferase system cellobiose-specific component IIB; Psort location: Cytoplasmic, score: 9.98.
       0.773
EDS75873.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.541
EDS75874.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.541
EDS75877.1
KEGG: bur:Bcep18194_A5700 1.6e-50 ABC transporter, fused ATPase subunits K06020; COG: COG0488 ATPase components of ABC transporters with duplicated ATPase domains; Psort location: CytoplasmicMembrane, score: 9.49.
       0.442
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: high (86%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.