STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75898.1Acetyltransferase, GNAT family; KEGG: mba:Mbar_A3398 1.6e-28 ribosomal-protein-alanine acetyltransferase K00676; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score: 8.87. (166 aa)    
Predicted Functional Partners:
EDS75899.1
Hypothetical protein; KEGG: rha:RHA1_ro00978 0.00023 probable dephospho-CoA kinase K00859; COG: COG2320 Uncharacterized conserved protein.
       0.697
EDS75139.1
Acetyltransferase, GNAT family; KEGG: dar:Daro_0099 2.5e-20 GCN5-related N-acetyltransferase:carbonic anhydrase, prokaryotic and plant K01673; COG: KOG3139 N-acetyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
    0.684
EDS75900.1
Hypothetical protein; COG: NOG31153 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
    0.543
EDS75901.1
Hypothetical protein; KEGG: lsl:LSL_0888 2.4e-11 arsC; arsenate reductase; COG: COG0394 Protein-tyrosine-phosphatase; Psort location: Cytoplasmic, score: 8.87.
       0.528
EDS75902.1
Hypothetical protein; KEGG: lsl:LSL_0888 9.6e-08 arsC; arsenate reductase; COG: COG0394 Protein-tyrosine-phosphatase.
       0.479
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.412
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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