STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75898.1Acetyltransferase, GNAT family; KEGG: mba:Mbar_A3398 1.6e-28 ribosomal-protein-alanine acetyltransferase K00676; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score: 8.87. (166 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
    
 0.866
EDS74218.1
Chorismate mutase; KEGG: aae:aq_951 3.3e-53 pheA; chorismate mutase/prephenate dehydratase K04093:K04518; COG: COG0077 Prephenate dehydratase; Psort location: Cytoplasmic, score: 9.98.
 
  
  0.859
EDS75817.1
Class II glutamine amidotransferase; KEGG: syn:sll1502 0. gltB; NADH-dependent glutamate synthase large subunit K00268; COG: COG0069 Glutamate synthase domain 2; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.847
EDS75139.1
Acetyltransferase, GNAT family; KEGG: dar:Daro_0099 2.5e-20 GCN5-related N-acetyltransferase:carbonic anhydrase, prokaryotic and plant K01673; COG: KOG3139 N-acetyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.714
EDS75899.1
Hypothetical protein; KEGG: rha:RHA1_ro00978 0.00023 probable dephospho-CoA kinase K00859; COG: COG2320 Uncharacterized conserved protein.
       0.700
EDS75900.1
Hypothetical protein; COG: NOG31153 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.541
EDS75901.1
Hypothetical protein; KEGG: lsl:LSL_0888 2.4e-11 arsC; arsenate reductase; COG: COG0394 Protein-tyrosine-phosphatase; Psort location: Cytoplasmic, score: 8.87.
       0.528
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.485
EDS75902.1
Hypothetical protein; KEGG: lsl:LSL_0888 9.6e-08 arsC; arsenate reductase; COG: COG0394 Protein-tyrosine-phosphatase.
       0.479
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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