STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75904.1Hydrolase, NUDIX family; KEGG: bcl:ABC0282 7.7e-38 ADP-ribose pyrophosphatase K01515; COG: COG1051 ADP-ribose pyrophosphatase. (204 aa)    
Predicted Functional Partners:
EDS74220.1
HAD hydrolase, family IA, variant 1; KEGG: tte:TTE2216 6.8e-23 gph; predicted phosphatase K06019; COG: COG0546 Predicted phosphatases; Psort location: Cytoplasmic, score: 8.87.
 
    0.878
EDS75903.1
KEGG: sak:SAK_0393 2.1e-19 Cof-like hydrolase/peptidyl-prolyl cis-trans isomerase domain protein; COG: COG0561 Predicted hydrolases of the HAD superfamily.
       0.678
EDS75139.1
Acetyltransferase, GNAT family; KEGG: dar:Daro_0099 2.5e-20 GCN5-related N-acetyltransferase:carbonic anhydrase, prokaryotic and plant K01673; COG: KOG3139 N-acetyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
    0.658
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.453
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.