STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75919.1Hypothetical protein; KEGG: tbd:Tbd_2668 2.4e-12 phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase K01923; COG: COG0628 Predicted permease; Psort location: CytoplasmicMembrane, score: 9.99. (374 aa)    
Predicted Functional Partners:
argG
KEGG: lma:LmjF23.0260 2.3e-132 argininosuccinate synthase, putative K01940; COG: COG0137 Argininosuccinate synthase; Psort location: Cytoplasmic, score: 8.87; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.518
EDS75921.1
Hypothetical protein; KEGG: fth:FTH_1859 0.0019 rbn; BN family tRNA processing ribonuclease; COG: NOG09742 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
       0.514
EDS75920.1
KEGG: lwe:lwe2158 4.7e-38 ABC transporter, ATP-binding protein K06020; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
     
 0.513
EDS75922.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.497
EDS74072.1
Transcriptional regulator, MarR family; KEGG: fnu:FN0362 0.0016 ATP synthase B chain, sodium ion specific K02109; COG: NOG16844 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.470
argH
Argininosuccinate lyase; KEGG: cpf:CPF_0682 2.5e-142 argH; argininosuccinate lyase K01755; COG: COG0165 Argininosuccinate lyase; Psort location: Cytoplasmic, score: 8.87.
       0.461
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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