STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75928.1EDD domain protein, DegV family; COG: COG1307 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. (288 aa)    
Predicted Functional Partners:
EDS75459.1
DAK2 domain fusion protein YloV; KEGG: bcz:BCZK3615 4.2e-133 dhaK; possible dihydroxyacetone-related kinase K00863; COG: COG1461 Predicted kinase related to dihydroxyacetone kinase; Psort location: Cytoplasmic, score: 8.87.
 
 0.994
EDS75926.1
KEGG: btk:BT9727_3471 9.6e-24 ser/thr protein phosphatase family protein; COG: COG1408 Predicted phosphohydrolases; Psort location: Cytoplasmic, score: 8.87.
     
 0.564
rnj
Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.563
EDS75929.1
KEGG: bcz:BCZK3833 3.6e-17 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 9.65.
       0.508
EDS75930.1
KEGG: rha:RHA1_ro06063 9.0e-28 probable ABC transporter, ATP-binding component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.508
EDS75931.1
Hypothetical protein; KEGG: bcc:BCc_109 5.5e-05 nuoN; NADH dehydrogenase I chain N K00329; Psort location: CytoplasmicMembrane, score: 9.99.
       0.508
EDS75932.1
Hypothetical protein; KEGG: cpf:CPF_0198 2.4e-05 sensory box histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.508
rex
CoA binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
  
   
 0.472
EDS75460.1
COG: COG1302 Uncharacterized protein conserved in bacteria.
 
    0.448
EDS74438.1
Hypothetical protein.
  
     0.447
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.