STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75930.1KEGG: rha:RHA1_ro06063 9.0e-28 probable ABC transporter, ATP-binding component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (301 aa)    
Predicted Functional Partners:
EDS75929.1
KEGG: bcz:BCZK3833 3.6e-17 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 9.65.
 
  
 0.925
EDS75931.1
Hypothetical protein; KEGG: bcc:BCc_109 5.5e-05 nuoN; NADH dehydrogenase I chain N K00329; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
EDS75932.1
Hypothetical protein; KEGG: cpf:CPF_0198 2.4e-05 sensory box histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
EDS75766.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.770
EDS75223.1
ABC transporter, permease protein; KEGG: cdi:DIP0495 2.8e-09 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; COG: COG0687 Spermidine/putrescine-binding periplasmic protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.755
EDS74111.1
ABC transporter, ATP-binding protein; KEGG: pen:PSEEN1283 1.2e-62 livG; branched-chain amino acid ABC transporter, ATP-binding protein; COG: COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
   
 
0.697
trxA
Thioredoxin; KEGG: hpa:HPAG1_0810 1.7e-17 thioredoxin K05905; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 9.65; Belongs to the thioredoxin family.
     
 0.646
EDS74112.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A5826 1.8e-70 ABC branched-chain amino acid family transporter, ATPase subunit K01996; COG: COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
   
 
0.632
EDS75046.1
KEGG: efa:EF0246 1.5e-80 amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 
0.565
EDS75291.1
KEGG: fnu:FN0801 2.1e-76 amino acid transport ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
   
 
0.561
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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