STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxAThioredoxin; KEGG: hpa:HPAG1_0810 1.7e-17 thioredoxin K05905; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 9.65; Belongs to the thioredoxin family. (104 aa)    
Predicted Functional Partners:
EDS74806.1
Putative thioredoxin-disulfide reductase; KEGG: cpe:CPE0783 1.3e-122 probable thioredoxin reductase K00384; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 9.65.
  
 0.969
trxB
KEGG: bcl:ABC3038 3.0e-84 trxB; thioredoxin reductase K00384; COG: COG0492 Thioredoxin reductase; Psort location: Cytoplasmic, score: 9.65.
  
 0.834
EDS75991.1
Hypothetical protein; KEGG: lsl:LSL_0888 4.0e-18 arsC; arsenate reductase; COG: COG0394 Protein-tyrosine-phosphatase; Psort location: Extracellular, score: 8.82.
  
 
 0.745
EDS75901.1
Hypothetical protein; KEGG: lsl:LSL_0888 2.4e-11 arsC; arsenate reductase; COG: COG0394 Protein-tyrosine-phosphatase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.745
EDS75105.1
KEGG: ctc:CTC01806 2.7e-209 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; COG: COG1410 Methionine synthase I, cobalamin-binding domain; Psort location: Cytoplasmic, score: 8.87.
    
 0.740
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
 
 
 0.685
EDS75930.1
KEGG: rha:RHA1_ro06063 9.0e-28 probable ABC transporter, ATP-binding component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
     
 0.646
EDS75929.1
KEGG: bcz:BCZK3833 3.6e-17 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 9.65.
       0.645
EDS75931.1
Hypothetical protein; KEGG: bcc:BCc_109 5.5e-05 nuoN; NADH dehydrogenase I chain N K00329; Psort location: CytoplasmicMembrane, score: 9.99.
       0.645
EDS75932.1
Hypothetical protein; KEGG: cpf:CPF_0198 2.4e-05 sensory box histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.645
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.