STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS75941.1ABC-2 type transporter; COG: COG1228 Imidazolonepropionase and related amidohydrolases; Psort location: CytoplasmicMembrane, score: 9.99. (239 aa)    
Predicted Functional Partners:
EDS75942.1
KEGG: fnu:FN0376 8.7e-30 sfuC; iron(III)-transport ATP-binding protein sfuC K02010; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 0.966
EDS75943.1
Transcriptional regulator, MerR family; KEGG: eci:UTI89_C3737 1.0e-07 yhdM; Zn(II)-responsive regulator of ZntA; COG: COG0789 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
    0.953
EDS75398.1
Hypothetical protein; COG: NOG28550 non supervised orthologous group.
 
     0.676
EDS74181.1
Hypothetical protein; KEGG: mma:MM3140 2.6e-06 flavodoxin K00230; Psort location: Cytoplasmic, score: 8.87.
 
     0.664
EDS75320.1
KEGG: cno:NT01CX_1801 6.9e-14 noxC; nitroreductase family protein; COG: COG0778 Nitroreductase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.659
EDS75441.1
Nitroreductase family protein; KEGG: fnu:FN1223 1.1e-17 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357; COG: COG0778 Nitroreductase; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.608
EDS74254.1
Nitroreductase family protein; KEGG: lmo:lmo0936 5.5e-28 similar to nitroflavin-reductase; COG: COG0778 Nitroreductase; Psort location: Cytoplasmic, score: 8.87; Belongs to the flavin oxidoreductase frp family.
  
  
 0.608
EDS73804.1
Transposase, IS4 family; COG: COG3385 FOG: Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.581
EDS73796.1
Transposase, IS4 family; COG: COG3385 FOG: Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.573
EDS75944.1
MutS domain V protein; KEGG: bcz:BCZK3528 1.4e-12 mutS; DNA mismatch repair protein, MutS family K03555; COG: COG0249 Mismatch repair ATPase (MutS family); Psort location: CytoplasmicMembrane, score: 9.99.
       0.535
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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