STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75953.1Hypothetical protein; KEGG: sai:Saci_0402 0.00098 asparaginase K01424; COG: COG1811 Uncharacterized membrane protein, possible Na+ channel or pump; Psort location: CytoplasmicMembrane, score: 9.99. (226 aa)    
Predicted Functional Partners:
EDS75952.1
Hypothetical protein; KEGG: vfi:VFA0937 6.9e-14 phosphoglycolate phosphatase K01091; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDS75951.1
Hypothetical protein; KEGG: ava:Ava_3074 9.1e-05 HAD-superfamily hydrolase subfamily IA, variant 3 K01838; Psort location: Cytoplasmic, score: 8.87.
       0.645
EDS75954.1
Ser/Thr phosphatase family protein; KEGG: cpe:CPE0191 2.6e-07 nagH; hyaluronoglucosaminidase K01197; COG: COG1409 Predicted phosphohydrolases; Psort location: Extracellular, score: 9.73.
       0.475
EDS75956.1
Putative membrane protein; KEGG: pae:PA1977 0.0014 sensor protein GLPS; COG: COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.431
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.