STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75955.1YibE/F-like protein; COG: COG5438 Predicted multitransmembrane protein; Psort location: CytoplasmicMembrane, score: 10.00. (380 aa)    
Predicted Functional Partners:
EDS75954.1
Ser/Thr phosphatase family protein; KEGG: cpe:CPE0191 2.6e-07 nagH; hyaluronoglucosaminidase K01197; COG: COG1409 Predicted phosphohydrolases; Psort location: Extracellular, score: 9.73.
 
    0.801
EDS74454.1
Ser/Thr phosphatase family protein; KEGG: ava:Ava_1170 1.5e-10 metallophosphoesterase K01078; COG: COG1409 Predicted phosphohydrolases.
 
     0.660
EDS75956.1
Putative membrane protein; KEGG: pae:PA1977 0.0014 sensor protein GLPS; COG: COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Psort location: CytoplasmicMembrane, score: 9.99.
       0.459
EDS75957.1
KEGG: tma:TM1430 1.5e-21 glycerol kinase K00864; COG: COG0554 Glycerol kinase; Psort location: Cytoplasmic, score: 8.87.
       0.459
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.