STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcpPyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. (213 aa)    
Predicted Functional Partners:
EDS75965.1
COG: COG3817 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
    0.951
EDS75964.1
COG: COG3819 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.948
EDS75967.1
AIG2-like family protein; COG: COG2105 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.826
EDS75968.1
M42 glutamyl aminopeptidase; KEGG: btk:BT9727_0795 6.8e-78 yhfE; glucanase; deblocking aminopeptidase K01269; COG: COG1363 Cellulase M and related proteins.
     
 0.627
EDS75963.1
Amino acid kinase family; KEGG: cac:CAC0278 4.7e-125 aspartate kinase K00928; COG: COG0527 Aspartokinases; Psort location: Cytoplasmic, score: 8.87; Belongs to the aspartokinase family.
       0.528
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.