STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75969.1Hypothetical protein; KEGG: cpf:CPF_0184 8.8e-12 nagH; hyaluronidase K01197; COG: NOG23393 non supervised orthologous group; Psort location: Extracellular, score: 9.73. (1323 aa)    
Predicted Functional Partners:
EDS75824.1
LPXTG-motif cell wall anchor domain protein; KEGG: smu:SMU.78 7.2e-234 fruA; fructan hydrolase; exo-beta-D-fructosidase; fructanase, FruA K03332; COG: COG1621 Beta-fructosidases (levanase/invertase); Psort location: Cellwall, score: 9.93.
    
 
0.735
EDS75974.1
Hypothetical protein; KEGG: cpe:CPE1876 2.3e-61 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.679
EDS75975.1
Hypothetical protein; KEGG: cpr:CPR_1843 3.5e-21 FucA K01206; COG: COG3669 Alpha-L-fucosidase.
 
   
 0.658
nagJ
O-GlcNAcase NagJ; KEGG: cpe:CPE0191 4.1e-65 nagH; hyaluronoglucosaminidase K01197; COG: NOG11197 non supervised orthologous group; Psort location: Cellwall, score: 9.49.
  
    0.639
EDS75466.1
Hypothetical protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
  
     0.585
EDS73701.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 2.6e-08 beta-N-acetylhexosaminidase K01207; COG: NOG08372 non supervised orthologous group.
  
  
  0.563
EDS75138.1
Putative transposase, IS4 family; KEGG: fnu:FN0522 0.00026 exonuclease SBCC K03546; COG: COG5421 Transposase; Psort location: Cytoplasmic, score: 8.87.
  
     0.537
EDS73738.1
Putative transposase, IS4 family; KEGG: fnu:FN0522 0.00026 exonuclease SBCC K03546; COG: COG5421 Transposase; Psort location: Cytoplasmic, score: 8.87.
  
     0.537
EDS74317.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
 
  
 0.532
EDS73904.1
Glycosyl hydrolase, family 88; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
 
  
 0.525
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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