STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75975.1Hypothetical protein; KEGG: cpr:CPR_1843 3.5e-21 FucA K01206; COG: COG3669 Alpha-L-fucosidase. (114 aa)    
Predicted Functional Partners:
EDS75974.1
Hypothetical protein; KEGG: cpe:CPE1876 2.3e-61 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
     0.994
EDS75976.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE1876 3.9e-38 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Extracellular, score: 9.55.
     0.986
EDS74056.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: cpf:CPF_1474 0. lacZ; beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Psort location: Extracellular, score: 8.07; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.743
EDS75600.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 3.0e-242 beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase; Psort location: Extracellular, score: 9.55.
 
  
 0.725
EDS73803.1
LPXTG-motif cell wall anchor domain protein; KEGG: ath:At5g13690 2.7e-88 MSH12.16; alpha-N-acetylglucosaminidase K01205; COG: NOG36584 non supervised orthologous group; Psort location: Extracellular, score: 9.97.
 
   
 0.713
EDS75808.1
Putative alpha-1,2-mannosidase; KEGG: cpe:CPE0191 3.4e-08 nagH; hyaluronoglucosaminidase K01197; COG: COG3537 Putative alpha-1,2-mannosidase; Psort location: Extracellular, score: 9.98.
 
   
 0.710
EDS73794.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 6.7e-206 beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase; Psort location: Extracellular, score: 9.73.
 
  
 0.704
EDS75799.1
Putative alpha-1,2-mannosidase; KEGG: cpf:CPF_0184 3.7e-14 nagH; hyaluronidase K01197; COG: COG3537 Putative alpha-1,2-mannosidase; Psort location: Extracellular, score: 9.98.
 
   
 0.695
EDS73793.1
F5/8 type C domain protein; KEGG: ddi:DDB0184151 5.8e-67 hypothetical protein K01205; COG: NOG36584 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
 
   
 0.693
EDS74594.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: sco:SCO2786 7.0e-109 hexA, SCC105.17c; beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase; Psort location: Extracellular, score: 9.95.
 
  
 0.691
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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