STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75976.1LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE1876 3.9e-38 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Extracellular, score: 9.55. (855 aa)    
Predicted Functional Partners:
EDS75975.1
Hypothetical protein; KEGG: cpr:CPR_1843 3.5e-21 FucA K01206; COG: COG3669 Alpha-L-fucosidase.
     0.986
EDS75974.1
Hypothetical protein; KEGG: cpe:CPE1876 2.3e-61 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
     0.984
EDS75977.1
GDSL-like protein; KEGG: rno:64189 3.4e-08 Pafah1b2; platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit K01062; COG: COG2755 Lysophospholipase L1 and related esterases; Psort location: Cytoplasmic, score: 8.87.
 
     0.730
EDS75978.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C0420 9.4e-33 phoB; positive response regulator for pho regulon K07657; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.671
EDS75979.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 7.6e-79 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.671
EDS74318.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
 
     0.616
EDS74317.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
 
     0.518
EDS75138.1
Putative transposase, IS4 family; KEGG: fnu:FN0522 0.00026 exonuclease SBCC K03546; COG: COG5421 Transposase; Psort location: Cytoplasmic, score: 8.87.
  
     0.515
EDS73738.1
Putative transposase, IS4 family; KEGG: fnu:FN0522 0.00026 exonuclease SBCC K03546; COG: COG5421 Transposase; Psort location: Cytoplasmic, score: 8.87.
  
     0.515
EDS75980.1
KEGG: lwe:lwe2133 1.8e-68 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.496
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.