STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75977.1GDSL-like protein; KEGG: rno:64189 3.4e-08 Pafah1b2; platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit K01062; COG: COG2755 Lysophospholipase L1 and related esterases; Psort location: Cytoplasmic, score: 8.87. (220 aa)    
Predicted Functional Partners:
EDS75978.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C0420 9.4e-33 phoB; positive response regulator for pho regulon K07657; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.773
EDS75979.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 7.6e-79 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EDS75976.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE1876 3.9e-38 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Extracellular, score: 9.55.
 
     0.729
EDS75974.1
Hypothetical protein; KEGG: cpe:CPE1876 2.3e-61 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
 
     0.684
EDS75975.1
Hypothetical protein; KEGG: cpr:CPR_1843 3.5e-21 FucA K01206; COG: COG3669 Alpha-L-fucosidase.
 
     0.638
EDS75973.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE1364 9.7e-17 beta-N-acetylhexosaminidase K01207; COG: NOG04032 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
 
     0.610
EDS75980.1
KEGG: lwe:lwe2133 1.8e-68 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.569
EDS75981.1
Efflux ABC transporter, permease protein; KEGG: pto:PTO0924 0.0020 signal peptidase I K03100; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
       0.565
EDS74318.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
 
   0.561
EDS74317.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
 
   0.533
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.