STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75494.1Thermophilic metalloprotease (M29); KEGG: cpr:CPR_1965 3.3e-117 aminopeptidase K01269; COG: COG2309 Leucyl aminopeptidase (aminopeptidase T). (419 aa)    
Predicted Functional Partners:
EDS75493.1
Hypothetical protein; COG: NOG23274 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.773
prfC
Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
 
     0.631
EDS75496.1
Hypothetical protein.
       0.572
EDS75497.1
Hypothetical protein.
       0.572
EDS75492.1
Sel1 repeat protein; KEGG: cch:Cag_1938 3.2e-43 Sel1-like repeat; COG: COG0790 FOG: TPR repeat, SEL1 subfamily; Psort location: Extracellular, score: 8.10.
       0.492
EDS75491.1
Hypothetical protein; KEGG: sha:SH0521 2.0e-10 ptsG; phosphotransferase system enzyme II K02777:K02778:K02779; COG: COG2190 Phosphotransferase system IIA components.
       0.437
EDS75028.1
Hypothetical protein; KEGG: lsl:LSL_1510 5.2e-16 pncA; pyrazinamidase / nicotinamidase K01463:K01440; COG: COG1335 Amidases related to nicotinamidase.
 
  
 0.409
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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