STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75549.1KEGG: rru:Rru_A0589 5.6e-83 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; COG: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (336 aa)    
Predicted Functional Partners:
oppC
COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EDS73756.1
KEGG: rha:RHA1_ro09047 8.5e-06 ABC peptide transporter, permease component K02033; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.997
EDS75547.1
KEGG: rha:RHA1_ro09047 1.9e-41 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.995
EDS75551.1
ABC transporter, substrate-binding protein, family 5; KEGG: shn:Shewana3_2650 4.8e-07 acetate kinase K00925; COG: COG4166 ABC-type oligopeptide transport system, periplasmic component; Psort location: Cellwall, score: 9.18.
 
 0.992
EDS73757.1
KEGG: rha:RHA1_ro09047 1.6e-46 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.975
EDS73758.1
ABC transporter, substrate-binding protein, family 5; KEGG: shn:Shewana3_2650 1.7e-28 acetate kinase K00925; COG: COG0747 ABC-type dipeptide transport system, periplasmic component; Psort location: Cellwall, score: 9.18.
 
 0.884
EDS75550.1
KEGG: reh:H16_B0716 3.9e-98 dppF3; ABC-type transporter, ATPase component: PepT family; COG: COG4608 ABC-type oligopeptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 
0.873
EDS74476.1
KEGG: fal:FRAAL3681 1.3e-35 putative ABC transporter ATP-binding protein; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
   
 
0.852
EDS75552.1
Hypothetical protein; KEGG: mxa:MXAN_0764 3.3e-18 peptidase, M24 (methionyl aminopeptidase 1) family K01423; COG: NOG08884 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.585
EDS74565.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: bld:BLi02574 8.2e-34 yqiZ; similar to amino acid ABC transporter (ATP-binding protein); RBL04297 K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.570
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.