STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75558.1PAP2 family protein; KEGG: saa:SAUSA300_1310 3.8e-20 PAP2 family protein K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.99. (174 aa)    
Predicted Functional Partners:
EDS75749.1
KEGG: ctc:CTC02332 1.0e-17 V-type sodium ATP synthase subunit C K02119; COG: COG1527 Archaeal/vacuolar-type H+-ATPase subunit C; Psort location: Cytoplasmic, score: 8.87.
    
 
 0.665
cysE
KEGG: gka:GK0084 1.5e-50 serine O-acetyltransferase K00640; COG: COG1045 Serine acetyltransferase; Psort location: Cytoplasmic, score: 9.98.
  
  
 0.620
EDS75753.1
ATP synthase, subunit F; KEGG: tko:TK1601 2.8e-08 archaeal/vacuolar-type H+-ATPase, subunit F K02122; Psort location: Cytoplasmic, score: 8.87.
  
   0.560
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.555
EDS75750.1
Hypothetical protein; KEGG: ctc:CTC02331 1.7e-22 V-type sodium ATP synthase subunit I K02123; COG: COG1269 Archaeal/vacuolar-type H+-ATPase subunit I; Psort location: CytoplasmicMembrane, score: 9.97.
    
   0.479
EDS75751.1
V-type ATPase 116kDa subunit family protein; KEGG: ctc:CTC02331 1.6e-78 V-type sodium ATP synthase subunit I K02123; COG: COG1269 Archaeal/vacuolar-type H+-ATPase subunit I; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the V-ATPase 116 kDa subunit family.
    
   0.479
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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