STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75561.1Hypothetical protein; COG: NOG11764 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (288 aa)    
Predicted Functional Partners:
EDS75283.1
Histidine triad domain protein; KEGG: spa:M6_Spy1466 3.6e-33 bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503; COG: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; Psort location: Cytoplasmic, score: 8.87.
 
  
   0.725
hsdR
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.589
EDS75560.1
Acylphosphatase; KEGG: pto:PTO0237 6.2e-13 acylphosphatase K01512; COG: COG1254 Acylphosphatases; Psort location: Cytoplasmic, score: 8.87.
       0.548
EDS74751.1
Type I restriction modification DNA specificity domain protein; KEGG: yps:YPTB0536 1.3e-58 putative type I restriction enzyme, S subunit K01154; COG: COG0732 Restriction endonuclease S subunits.
  
    0.508
EDS74752.1
KEGG: blo:BL1783 3.1e-41 hsdS; HsdS specificity protein of type I restriction-modification system K01154; COG: NOG32801 non supervised orthologous group.
  
    0.508
EDS75680.1
Hypothetical protein; KEGG: wbr:WGLp018 0.0014 surA; parvulin-like peptidyl-prolyl isomerase K03771; COG: COG2378 Predicted transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
 
 
  0.466
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
    
  0.425
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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