Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS75587.1Hypothetical protein; COG: NOG19109 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (138 aa)    
Predicted Functional Partners:
EDS75586.1
Hypothetical protein.
       0.773
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.656
EDS75588.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.596
EDS74181.1
Hypothetical protein; KEGG: mma:MM3140 2.6e-06 flavodoxin K00230; Psort location: Cytoplasmic, score: 8.87.
  
     0.593
EDS74338.1
Hypothetical protein; COG: COG0250 Transcription antiterminator.
  
     0.579
EDS75190.1
Transcription termination/antitermination factor NusG; COG: COG0250 Transcription antiterminator; Psort location: Cytoplasmic, score: 8.87.
  
     0.474
EDS75856.1
KEGG: hpa:HPAG1_1162 2.0e-30 ABC transporter, ATP-binding protein K06022; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.472
EDS75345.1
Cyclic nucleotide-binding domain protein; KEGG: eci:UTI89_C3860 2.0e-08 crp; CRP-cAMP transcriptional dual regulator K00924; COG: NOG14713 non supervised orthologous group.
 
 
  
 0.472
EDS75905.1
DNA-binding helix-turn-helix protein; COG: NOG16841 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
    0.445
EDS75585.1
Hypothetical protein; KEGG: btk:BT9727_2520 4.9e-05 6-aminohexanoate-dimer hydrolase.
       0.442
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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