STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75637.1Hypothetical protein; KEGG: bcl:ABC0753 0.0016 sipW; signal peptidase I K03100; Psort location: Cytoplasmic, score: 8.87. (143 aa)    
Predicted Functional Partners:
EDS75638.1
ABC transporter, ATP-binding protein; KEGG: hpa:HPAG1_0365 9.7e-47 multidrug resistance protein K01509; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
   
  0.820
EDS75634.1
Hypothetical protein; COG: NOG21821 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.791
EDS75636.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.784
EDS75635.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.782
EDS75633.1
Hypothetical protein; KEGG: pfa:PFI0960w 0.0016 dolichyl-diphosphooligosaccharide--protein-glyco transferase,putative K00730; COG: COG2770 FOG: HAMP domain.
       0.773
EDS75631.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.757
EDS75632.1
Hypothetical protein.
       0.757
EDS74271.1
ABC transporter, ATP-binding protein; KEGG: spd:SPD_0049 5.3e-55 comA; competence factor transporting ATP-binding/permease protein ComA; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: CytoplasmicMembrane, score: 10.00.
   
  0.606
EDS75763.1
Hypothetical protein; KEGG: pub:SAR11_0453 8.8e-05 aroK; shikimate kinase K00891.
   
 0.497
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.482
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.