STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75638.1ABC transporter, ATP-binding protein; KEGG: hpa:HPAG1_0365 9.7e-47 multidrug resistance protein K01509; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00. (527 aa)    
Predicted Functional Partners:
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.907
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.901
EDS75634.1
Hypothetical protein; COG: NOG21821 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.852
EDS75635.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.841
EDS75291.1
KEGG: fnu:FN0801 2.1e-76 amino acid transport ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.834
EDS75637.1
Hypothetical protein; KEGG: bcl:ABC0753 0.0016 sipW; signal peptidase I K03100; Psort location: Cytoplasmic, score: 8.87.
   
   0.749
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.719
EDS75015.1
KEGG: mcp:MCAP_0202 6.5e-57 spermidine/putrescine ABC transporter, ATP-binding protein K02052; COG: COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.700
EDS74983.1
Hypothetical protein; KEGG: bbu:BB0420 0.00095 sensory transduction histidine kinase, putative K02489; COG: NOG21821 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.629
EDS75821.1
Sodium ion-translocating decarboxylase, beta subunit; KEGG: hpa:HPAG1_0365 1.5e-57 multidrug resistance protein K01509; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  
0.613
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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