STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS75292.1ABC transporter, permease protein; KEGG: ret:RHE_PF00254 5.0e-29 glnP, glnQ; glutamine ABC transporter, ATP-binding protein K02028; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00. (227 aa)    
Predicted Functional Partners:
EDS75291.1
KEGG: fnu:FN0801 2.1e-76 amino acid transport ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 0.999
EDS75293.1
KEGG: hpa:HPAG1_1111 1.4e-15 glutamine ABC transporter, periplasmic glutamine-binding protein K05359; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 9.87.
 0.999
EDS75046.1
KEGG: efa:EF0246 1.5e-80 amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 0.997
EDS74030.1
KEGG: efa:EF0246 8.2e-82 amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 0.997
EDS74028.1
Hypothetical protein; KEGG: eci:UTI89_C2121 4.5e-08 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: Cytoplasmic, score: 8.87.
 
 0.832
EDS75290.1
Putative transaminase; KEGG: sai:Saci_1837 9.0e-44 aspartate aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score: 8.87.
       0.776
EDS74029.1
ABC transporter, permease protein; KEGG: bja:blr4464 6.7e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
0.741
EDS75047.1
KEGG: hpa:HPAG1_0922 1.7e-26 amino acid ABC transporter, permease protein; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 9.70.
 
0.731
EDS75505.1
KEGG: fal:FRAAL5379 7.6e-47 ABC transporter ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 
  0.616
EDS74857.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: sps:SPs0964 4.0e-34 putative spermidine / putrescine ABC transporter (ATP-binding protein) K02052; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 
  0.615
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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